Class: Volumes
Class representing volume metadata
URI: https://w3id.org/osc-em/oscem-schemas-spa/:Volumes
erDiagram
Volumes {
    string volume_type  
    integer vol_number_particles  
    integerList size  
}
Descriptors {
    string descriptor_name  
}
Any {
}
QuantityValue {
    string unit  
    float value  
}
IsosurfaceImages {
    string front_view  
    string side_view  
    string top_view  
}
OrthogonalSlices {
    string orthogonal_slices_X  
    string orthogonal_slices_Y  
    string orthogonal_slices_Z  
}
Volumes ||--|o OrthogonalSlices : "orthogonal_slices"
Volumes ||--|o IsosurfaceImages : "isosurface_images"
Volumes ||--|o QuantityValue : "vol_resolution"
Volumes ||--}o Descriptors : "descriptors"
Descriptors ||--|o Any : "descriptor_thing"
Slots
| Name | Cardinality and Range | Description | Inheritance | 
|---|---|---|---|
| volume_type | 1 String | Indicates the type of volume | direct | 
| vol_number_particles | 0..1 Integer | Number of particles associated to volume | direct | 
| size | * Integer | Size of the volume | direct | 
| orthogonal_slices | 0..1 OrthogonalSlices | orthogonal slices of volume | direct | 
| isosurface_images | 0..1 IsosurfaceImages | isosurface images of volume | direct | 
| vol_resolution | 0..1 QuantityValue | Resolution of volume | direct | 
| descriptors | * Descriptors | List of custom descriptors for user-defined key-value pairs describing how mo... | direct | 
Usages
| used by | used in | type | used | 
|---|---|---|---|
| Processing | volumes | range | Volumes | 
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/osc-em/oscem-schemas-spa
Mappings
| Mapping Type | Mapped Value | 
|---|---|
| self | https://w3id.org/osc-em/oscem-schemas-spa/:Volumes | 
| native | https://w3id.org/osc-em/oscem-schemas-spa/:Volumes | 
LinkML Source
Direct
name: Volumes
description: Class representing volume metadata
from_schema: https://w3id.org/osc-em/oscem-schemas-spa
slots:
- volume_type
- vol_number_particles
- size
- orthogonal_slices
- isosurface_images
- vol_resolution
- descriptors
slot_usage:
  volume_type:
    name: volume_type
    required: true
  vol_number_particles:
    name: vol_number_particles
    required: false
  size:
    name: size
    required: false
  orthogonal_slices:
    name: orthogonal_slices
    required: false
  isosurface_images:
    name: isosurface_images
    required: false
  vol_resolution:
    name: vol_resolution
    required: false
  descriptors:
    name: descriptors
    required: false
Induced
name: Volumes
description: Class representing volume metadata
from_schema: https://w3id.org/osc-em/oscem-schemas-spa
slot_usage:
  volume_type:
    name: volume_type
    required: true
  vol_number_particles:
    name: vol_number_particles
    required: false
  size:
    name: size
    required: false
  orthogonal_slices:
    name: orthogonal_slices
    required: false
  isosurface_images:
    name: isosurface_images
    required: false
  vol_resolution:
    name: vol_resolution
    required: false
  descriptors:
    name: descriptors
    required: false
attributes:
  volume_type:
    name: volume_type
    description: Indicates the type of volume
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: volume_type
    owner: Volumes
    domain_of:
    - Volumes
    range: string
    required: true
  vol_number_particles:
    name: vol_number_particles
    description: Number of particles associated to volume
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: vol_number_particles
    owner: Volumes
    domain_of:
    - Volumes
    range: integer
    required: false
  size:
    name: size
    description: Size of the volume
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: size
    owner: Volumes
    domain_of:
    - Volumes
    range: integer
    required: false
    multivalued: true
  orthogonal_slices:
    name: orthogonal_slices
    description: orthogonal slices of volume
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: orthogonal_slices
    owner: Volumes
    domain_of:
    - Volume
    - Volumes
    range: OrthogonalSlices
    required: false
  isosurface_images:
    name: isosurface_images
    description: isosurface images of volume
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: isosurface_images
    owner: Volumes
    domain_of:
    - Volume
    - Volumes
    range: IsosurfaceImages
    required: false
  vol_resolution:
    name: vol_resolution
    description: Resolution of volume
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: vol_resolution
    owner: Volumes
    domain_of:
    - Volumes
    range: QuantityValue
    required: false
  descriptors:
    name: descriptors
    description: List of custom descriptors for user-defined key-value pairs describing
      how movies were obtained or any related information
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: descriptors
    owner: Volumes
    domain_of:
    - Movies
    - Micrographs
    - CTFs
    - Coordinates
    - Classes2D
    - Classes3D
    - Volumes
    range: Descriptors
    required: false
    multivalued: true