Class: CTFs

Class representing Contrast Transfer Function (CTF) metadata

URI: https://w3id.org/osc-em/oscem-schemas-spa/:CTFs

classDiagram class CTFs click CTFs href "../CTFs" CTFs : amplitude_contrast CTFs : astigmatism CTFs --> "0..1" Astigmatism : astigmatism click Astigmatism href "../Astigmatism" CTFs : defocus CTFs --> "0..1" Defocus : defocus click Defocus href "../Defocus" CTFs : descriptors CTFs --> "*" Descriptors : descriptors click Descriptors href "../Descriptors" CTFs : resolution CTFs --> "0..1" Resolution : resolution click Resolution href "../Resolution"

Slots

Name	Cardinality and Range	Description	Inheritance
amplitude_contrast	0..1 Float	Amplitude contrast	direct
defocus	0..1 Defocus	Defocus metadata	direct
resolution	0..1 Resolution	Resolution metadata	direct
astigmatism	0..1 Astigmatism	Astigmatism metadata	direct
descriptors	* Descriptors	List of custom descriptors for user-defined key-value pairs describing how mo...	direct

Usages

used by	used in	type	used
Processing	ctfs	range	CTFs

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/osc-em/oscem-schemas-spa

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/osc-em/oscem-schemas-spa/:CTFs
native	https://w3id.org/osc-em/oscem-schemas-spa/:CTFs

LinkML Source

Direct

name: CTFs
description: Class representing Contrast Transfer Function (CTF) metadata
from_schema: https://w3id.org/osc-em/oscem-schemas-spa
slots:
- amplitude_contrast
- defocus
- resolution
- astigmatism
- descriptors
slot_usage:
  amplitude_contrast:
    name: amplitude_contrast
    required: false
  defocus:
    name: defocus
    required: false
  resolution:
    name: resolution
    required: false
  astigmatism:
    name: astigmatism
    required: false
  descriptors:
    name: descriptors
    required: false

Induced

name: CTFs
description: Class representing Contrast Transfer Function (CTF) metadata
from_schema: https://w3id.org/osc-em/oscem-schemas-spa
slot_usage:
  amplitude_contrast:
    name: amplitude_contrast
    required: false
  defocus:
    name: defocus
    required: false
  resolution:
    name: resolution
    required: false
  astigmatism:
    name: astigmatism
    required: false
  descriptors:
    name: descriptors
    required: false
attributes:
  amplitude_contrast:
    name: amplitude_contrast
    description: Amplitude contrast
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: amplitude_contrast
    owner: CTFs
    domain_of:
    - CTFs
    range: float
    required: false
  defocus:
    name: defocus
    description: Defocus metadata
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: defocus
    owner: CTFs
    domain_of:
    - CTFs
    range: Defocus
    required: false
  resolution:
    name: resolution
    description: Resolution metadata
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: resolution
    owner: CTFs
    domain_of:
    - CTFs
    range: Resolution
    required: false
  astigmatism:
    name: astigmatism
    description: Astigmatism metadata
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: astigmatism
    owner: CTFs
    domain_of:
    - CTFs
    range: Astigmatism
    required: false
  descriptors:
    name: descriptors
    description: List of custom descriptors for user-defined key-value pairs describing
      how movies were obtained or any related information
    from_schema: https://w3id.org/osc-em/oscem-schemas-spa
    rank: 1000
    alias: descriptors
    owner: CTFs
    domain_of:
    - Movies
    - Micrographs
    - CTFs
    - Coordinates
    - Classes2D
    - Classes3D
    - Volumes
    range: Descriptors
    required: false
    multivalued: true