Class: SampleEnv

Unifying class to describe the full sample.

URI: https://w3id.org/osc-em/oscem-schemas-env-tomo/:SampleEnv

classDiagram class SampleEnv click SampleEnv href "../SampleEnv" SampleEnv : freezing SampleEnv --> "0..1" Freezing : freezing click Freezing href "../Freezing" SampleEnv : specimen_env SampleEnv --> "1" SpecimenEnv : specimen_env click SpecimenEnv href "../SpecimenEnv" SampleEnv : thinning SampleEnv --> "0..1" Thinning : thinning click Thinning href "../Thinning" SampleEnv : tomogram_features SampleEnv --> "0..1" TomogramFeatures : tomogram_features click TomogramFeatures href "../TomogramFeatures"

Slots

Name	Cardinality and Range	Inheritance
specimen_env	1 SpecimenEnv	direct
freezing	0..1 Freezing	direct
thinning	0..1 Thinning	direct
tomogram_features	0..1 TomogramFeatures	direct

Usages

used by	used in	type	used
EMDatasetEnv	sample	range	SampleEnv

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/osc-em/oscem-schemas-env-tomo

Mappings

Mapping Type	Mapped Value
self	https://w3id.org/osc-em/oscem-schemas-env-tomo/:SampleEnv
native	https://w3id.org/osc-em/oscem-schemas-env-tomo/:SampleEnv

LinkML Source

Direct

name: SampleEnv
description: Unifying class to describe the full sample.
from_schema: https://w3id.org/osc-em/oscem-schemas-env-tomo
slots:
- specimen_env
- freezing
- thinning
- tomogram_features
slot_usage:
  specimen_env:
    name: specimen_env
    required: true

Induced

name: SampleEnv
description: Unifying class to describe the full sample.
from_schema: https://w3id.org/osc-em/oscem-schemas-env-tomo
slot_usage:
  specimen_env:
    name: specimen_env
    required: true
attributes:
  specimen_env:
    name: specimen_env
    from_schema: https://w3id.org/osc-em/oscem-schemas-env-tomo
    rank: 1000
    alias: specimen_env
    owner: SampleEnv
    domain_of:
    - SampleEnv
    range: SpecimenEnv
    required: true
  freezing:
    name: freezing
    from_schema: https://w3id.org/osc-em/oscem-schemas-env-tomo
    rank: 1000
    alias: freezing
    owner: SampleEnv
    domain_of:
    - SampleEnv
    range: Freezing
  thinning:
    name: thinning
    from_schema: https://w3id.org/osc-em/oscem-schemas-env-tomo
    rank: 1000
    alias: thinning
    owner: SampleEnv
    domain_of:
    - SampleEnv
    range: Thinning
  tomogram_features:
    name: tomogram_features
    from_schema: https://w3id.org/osc-em/oscem-schemas-env-tomo
    rank: 1000
    alias: tomogram_features
    owner: SampleEnv
    domain_of:
    - SampleEnv
    range: TomogramFeatures